anatomy & physiology
Thorax & Respiratory System
Integrated notes for USMLE Step 1
🔬 histology
🧬 embryology
🫁 lung anatomy
⚕️ clinical
🫀 Chest wall & mammary gland
Mammary gland – modified sweat gland, subcutaneous. Fat determines size/shape. Suspensory (Cooper) ligaments attach skin to deep fascia; tumor infiltration causes skin dimpling (peau d'orange).
Vascular supply
- Internal thoracic artery (subclavian branch) → medial breast.
- Lateral thoracic artery (axillary branch) → lateral breast, runs with long thoracic nerve (superficial to serratus anterior).
Lymphatic drainage (key for metastasis)
- 75% → axillary nodes (especially pectoral group) from nipple & upper/lateral/inferior quadrants.
- Medial quadrant → parasternal nodes (along internal thoracic vessels); can spread to contralateral breast.
Clinical During radical mastectomy, long thoracic nerve injury → winged scapula + weakness in arm abduction above 90°. Thoracodorsal nerve damage → weakness in extension & medial rotation of arm.
🧬 Embryology – lower respiratory system
Timeline & origin
- Week 4: respiratory (laryngotracheal) diverticulum from ventral foregut endoderm.
- Endoderm → epithelium; mesoderm → cartilage, muscle, CT.
- Distal enlargement → lung bud → bifurcation into 2 bronchial buds → branching to main, secondary, tertiary bronchi by month 6.
- Tertiary bronchi correspond to bronchopulmonary segments.
Tracheoesophageal septum
- Separates trachea from esophagus.
- Defective septum → tracheoesophageal fistula (most common: distal third of trachea to esophagus).
- Associated with esophageal atresia, polyhydramnios, regurgitation, choking/cyanosis after feeding, abdominal distention, pneumonitis.
⚠️ Pulmonary hypoplasia causes: congenital diaphragmatic hernia (left lung affected) & bilateral renal agenesis (oligohydramnios → Potter sequence).
🫁 Pleura & pleural cavity
Serous membranes: parietal (outer) and visceral (inner). Pleural cavity = potential space with thin serous fluid for friction-free movement.
Parietal pleura – regional parts
- Costal – lines ribs & intercostal spaces.
- Diaphragmatic – covers thoracic surface of diaphragm.
- Mediastinal – covers mediastinum, reflects at hilum to become visceral.
- Cervical – extends above 1st rib (cupula).
Innervation
- Parietal: intercostal nerves (costal & peripheral diaphragmatic) → local dermatomal pain.
- Central diaphragmatic & mediastinal pleura: phrenic nerve (C3–C5) → referred shoulder pain.
- Visceral pleura: autonomic visceral afferents.
Pleural reflections & recesses
- Sternal reflection: costal → mediastinal (costal cartilages 2–4).
- Costodiaphragmatic recess: space between costal & diaphragmatic pleura, lungs do not occupy except deep inspiration.
- Costomediastinal recess: left side, due to cardiac notch; occupied by lingula during inspiration.
| Landmark | Visceral pleura (lung) | Parietal pleura |
|---|---|---|
| Midclavicular | 6th rib | 8th rib |
| Midaxillary | 8th rib | 10th rib |
| Paravertebral | 10th rib | 12th rib |
Pneumothorax Open: air enters via chest wall wound, mediastinum shifts away during inspiration, back during expiration. Tension: flap-valve mechanism, air trapped → mediastinal shift worsens, compresses opposite lung & reduces venous return – life-threatening.
Lungs – surfaces, lobes, lymph
Surfaces
- Costal – smooth, convex, adjacent to ribs.
- Mediastinal – concave, contains hilum and cardiac impression (deeper on left).
- Diaphragmatic (base) – rests on diaphragm; right side higher due to liver.
Lobes & fissures
- Right lung: 3 lobes (superior, middle, inferior) – horizontal & oblique fissures.
- Left lung: 2 lobes (superior, inferior) – oblique fissure; lingula corresponds to right middle lobe.
Lymphatic drainage
- Superficial plexus (under visceral pleura) & deep plexus (along bronchi).
- Bronchopulmonary (hilar) nodes → receive from both plexuses.
- Tracheobronchial nodes → at bifurcation → bronchiomediastinal trunks.
- Left lower lobe can drain to right bronchiomediastinal trunk → right lymphatic duct (important for metastasis).
High yield Right main bronchus is shorter, wider, more vertical → aspirated foreign bodies more often enter right lung (posterior basal segment of inferior lobe).
Pancoast tumor
Apical lung tumor → thoracic outlet syndrome (compression of subclavian vessels/brachial plexus).
🔬 Respiratory histology
Lung surface area ~120 m². Air-blood barrier: surfactant + type I pneumocyte + shared basal lamina + capillary endothelium (thickness ~0.1–0.5 µm).
Trachea & bronchi – epithelium
- Pseudostratified ciliated columnar with goblet cells (mucous), basal cells (stem cells), brush cells, neuroendocrine (Kulchitsky) cells.
- Cilia beat to move mucous toward pharynx (mucociliary escalator).
- Goblet cells & submucosal glands produce mucous; traps dust/pathogens.
⚠️ Cystic fibrosis: thick mucous due to defective chloride transport → impaired mucociliary clearance → recurrent infections.
Bronchioles
- No cartilage, no glands. Epithelium: ciliated simple cuboidal/columnar.
- Clara cells (bronchiolar secretory): nonciliated, secrete surfactant-like fluid, detoxify, stem cells; abundant in terminal bronchioles (~80% of cells).
- Terminal bronchioles → last conducting airways; then respiratory bronchioles (with alveoli in walls) → alveolar ducts & sacs.
COPD Emphysema (loss of elastic fibers) vs asthma (reversible airway narrowing). Emphysema – irreversible; asthma – reversible.
Trachea, bronchi & bronchioles – structural comparison
| Feature | Trachea | Bronchi | Bronchioles |
|---|---|---|---|
| Epithelium | Pseudostratified ciliated columnar, goblet cells | Pseudostratified → simple columnar | Simple cuboidal/columnar, ciliated + Clara cells |
| Cartilage | 16–20 C-shaped rings | Irregular plates | None |
| Glands | Seromucous | Fewer seromucous | None |
| Smooth muscle | Between open ends of C-rings | Prominent | Highest proportion (elastic fibers) |
Epithelial cell types
- Columnar – 200–300 cilia, microvilli.
- Goblet – secrete mucin.
- Basal – stem cells.
- Neuroendocrine (Kulchitsky) – APUD, DNES; at airway branch points; can give rise to bronchial carcinoid.
Squamous metaplasia Chronic irritation (smoking) → ciliated columnar → squamous (reversible if stimulus removed). Kartagener syndrome – dynein defect → immotile cilia → recurrent respiratory infections, male infertility.
Alveolar ducts, sacs & alveoli
Alveoli constitute 80–85% lung volume. ~300 million alveoli, each ~200 µm diameter.
Type I pneumocytes
- Cover 90–95% of alveolar surface, but only 40% of cells.
- Very thin (squamous) – main site of gas exchange.
- Post-mitotic (cannot divide).
Type II pneumocytes
- 60% of cells, cover 5–10% of surface.
- Produce surfactant (phospholipid/protein mixture) that reduces surface tension, prevents alveolar collapse.
- Stem cells for type I & type II.
- Contain lamellar bodies (myelin figures).
Alveolar wall – rich capillary network (pulmonary arteries). Contains fibroblasts, macrophages, myofibroblasts, mast cells. Collagen (type I in bronchi/bronchioles) & elastic fibers (recoil). Pores of Kohn – collateral ventilation (10–15 µm).
Alveolar air →
Surfactant →
Type I cell →
Basal lamina (shared) →
Capillary endothelium →
Blood
Respiratory distress syndrome Surfactant deficiency (prematurity, maternal diabetes, asphyxia). Leads to atelectasis, hyaline membrane disease (eosinophilic fluid). Corticosteroids accelerate surfactant synthesis; insulin antagonizes this effect.
⚕️ Clinical pearls & high-yield summary
Intercostal spaces
- VAN (vein–artery–nerve) in costal groove; nerve inferior.
- Thoracentesis: lower part of space to avoid neurovascular bundle.
- Intercostal nerve block: upper part of space.
Diaphragm & pleura
- Central diaphragmatic pleura innervated by phrenic nerve (C3–C5) → referred shoulder pain.
- Costal pleura → intercostal nerves → local chest pain.
Embryology recall
- Tracheoesophageal fistula: most common type (90%) – distal esophagus to trachea.
- Congenital diaphragmatic hernia → left lung hypoplasia.
- Bilateral renal agenesis → oligohydramnios → Potter sequence → pulmonary hypoplasia.
Lung auscultation
- Upper lobes: anterior chest above 4th rib (right) / left similar.
- Right middle lobe: anterior chest below 4th rib, medial.
- Inferior lobes: posterior chest.
High-yield facts
- Pancoast tumor – apical lung cancer → Horner syndrome (if sympathetic chain involved) + thoracic outlet.
- Mesothelioma – malignant pleural tumor linked to asbestos.
- Kulchitsky cells – neuroendocrine → carcinoid tumors (bronchial carcinoid).
- Clara cells – stem cells, detoxification, chloride transport; defective in cystic fibrosis.
- Emphysema – loss of elastic fibers → air trapping, irreversible.
- Asthma – reversible bronchoconstriction.